Would probably need more context/data to answer the question, but aiming to help…It sounds safe to say the simulation is unstable, and a number of things could be ‘the problem’. The bed slope (being horizontal) is important, as are spacing between XS’s (maybe tighter is needed?) and transition of area available for conveyance between adjacent XS’s (maybe the adjacent XS’s aren’t similar enough?), HTab hydraulic parameters (maybe set finer around this trouble spot), controls/obstructions, discharge inputs (if any other than an inflow hydrograph), etc.