SOLUTION!
Thank you for your help i tried some of you suggestions with a new file and it worked great. So first if you are using CAD make sure your station 0 of you alignment is at the down stream end with stations going upstream. Then once in HEC-RAS go to Geometry editor-GIS Tools-Reach Invert Line Tables-reverse order (to make sure your arrow in HEC-RAS is point downstream toward station 0). Then run your analysis.
A little counter intuitive, HEC-RAS needs to make there station controls easier to control.
Thank you everyone for your help!