I mean….thats not really an issue, thats a direct output from your direct input of a boundary condition.
If you are using a stage i highly suggest you change that because i personally do not believe they work as intended.
If you are using normal depth, that would be an incorrect DS BC for a reach ending in a junction with another reach. If you are intending on not showing the impacts of the main river you can change your normal depth to something abnormally high and the backwater effect will be removed, but this would be an incorrect simulation (or one that neglects the main reach)